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<h1 id="firstHeading" class="firstHeading mw-first-heading"><span class="mw-page-title-main">Classification double</span></h1>
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<div id="mw-content-text" class="mw-body-content mw-content-ltr" lang="fr" dir="ltr"><div class="mw-content-ltr mw-parser-output" lang="fr" dir="ltr"><p>La <b>Classification double</b> ou <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Biclustering</span>&nbsp;»</span> est une technique d'<a href="Exploration_de_donn%C3%A9es" title="Exploration de données">exploration de données</a> non-supervisée permettant de segmenter simultanément les lignes et les colonnes d'une matrice. Plus formellement<sup id="cite_ref-1" class="reference"><a href="#cite_note-1"><span class="cite-bracket">[</span>1<span class="cite-bracket">]</span></a></sup>, la définition de la classification double peut s'exprimer de la manière suivante (pour le type de classification par colonne)&nbsp;:
</p>
<div class="center">soit <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle \mathrm {E} }">
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<mrow class="MJX-TeXAtom-ORD">
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<annotation encoding="application/x-tex">{\displaystyle \mathrm {M} \times \mathrm {N} }</annotation>
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</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/8e5805fb3c2e922fdc2e072f28cb92fe6c0d58fa.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.338ex; width:6.714ex; height:2.176ex;" alt="{\displaystyle \mathrm {M} \times \mathrm {N} }" loading="lazy"></span>, soient <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle \mathrm {I} \subseteq \mathrm {M} {\text{ , }}J\subseteq \mathrm {N} }">
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<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<mrow class="MJX-TeXAtom-ORD">
<mi mathvariant="normal">I</mi>
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<mo>⊆<!-- ⊆ --></mo>
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<mi mathvariant="normal">M</mi>
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<mi>J</mi>
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<mrow class="MJX-TeXAtom-ORD">
<mi mathvariant="normal">N</mi>
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</mrow>
<annotation encoding="application/x-tex">{\displaystyle \mathrm {I} \subseteq \mathrm {M} {\text{ , }}J\subseteq \mathrm {N} }</annotation>
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</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/03e480a9c35e4659afba90d449cf5ea2a627409a.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.671ex; width:14.19ex; height:2.509ex;" alt="{\displaystyle \mathrm {I} \subseteq \mathrm {M} {\text{ , }}J\subseteq \mathrm {N} }" loading="lazy"></span>, alors <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle \mathrm {E} _{IJ}}">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
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<msub>
<mrow class="MJX-TeXAtom-ORD">
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<mi>I</mi>
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<annotation encoding="application/x-tex">{\displaystyle \mathrm {E} _{IJ}}</annotation>
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</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/251b444492e793f1f77fcd08433e5b3e60417692.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.671ex; width:3.684ex; height:2.509ex;" alt="{\displaystyle \mathrm {E} _{IJ}}" loading="lazy"></span> est appelé <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">bicluster</span>&nbsp;»</span> de <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle \mathrm {E} }">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<mrow class="MJX-TeXAtom-ORD">
<mi mathvariant="normal">E</mi>
</mrow>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle \mathrm {E} }</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/be1811407dea8b43727d28dbe8da7251985b03e8.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.338ex; width:1.583ex; height:2.176ex;" alt="{\displaystyle \mathrm {E} }" loading="lazy"></span> lorsque <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle \mathrm {E} _{i_{1},j}=\mathrm {E} _{i_{2},j}=..=\mathrm {E} _{i_{m},j}}">
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<mstyle displaystyle="true" scriptlevel="0">
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<annotation encoding="application/x-tex">{\displaystyle \mathrm {E} _{i_{1},j}=\mathrm {E} _{i_{2},j}=..=\mathrm {E} _{i_{m},j}}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/cf133230e5d8bdc58991f53bb6b5e78718eff099.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -1.005ex; width:23.624ex; height:2.843ex;" alt="{\displaystyle \mathrm {E} _{i_{1},j}=\mathrm {E} _{i_{2},j}=..=\mathrm {E} _{i_{m},j}}" loading="lazy"></span> pour tout <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle j\in J{\text{ et }}(i_{1},i_{2},...i_{m})\in \mathrm {M} }">
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<mrow class="MJX-TeXAtom-ORD">
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<mi>j</mi>
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<annotation encoding="application/x-tex">{\displaystyle j\in J{\text{ et }}(i_{1},i_{2},...i_{m})\in \mathrm {M} }</annotation>
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</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/e1fab5248ebf18e22c13209b4cf92a2679dbf074.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.838ex; margin-left: -0.027ex; width:26.537ex; height:2.843ex;" alt="{\displaystyle j\in J{\text{ et }}(i_{1},i_{2},...i_{m})\in \mathrm {M} }" loading="lazy"></span></div>

<div class="mw-heading mw-heading2"><h2 id="Application">Application</h2></div>
<p>Le <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">biclustering</span>&nbsp;»</span> a été utilisé massivement en biologie<sup id="cite_ref-2" class="reference"><a href="#cite_note-2"><span class="cite-bracket">[</span>2<span class="cite-bracket">]</span></a></sup> - par exemple dans l'analyse de l'<a href="Expression_g%C3%A9n%C3%A9tique" class="mw-redirect" title="Expression génétique">expression génétique</a> par Yizong Cheng et George M. Church<sup id="cite_ref-3" class="reference"><a href="#cite_note-3"><span class="cite-bracket">[</span>3<span class="cite-bracket">]</span></a></sup> <sup class="reference cite_virgule">,</sup> <sup id="cite_ref-4" class="reference"><a href="#cite_note-4"><span class="cite-bracket">[</span>4<span class="cite-bracket">]</span></a></sup> -, mais aussi dans d'autres domaines tels que la compression d'image de synthèse<sup id="cite_ref-5" class="reference"><a href="#cite_note-5"><span class="cite-bracket">[</span>5<span class="cite-bracket">]</span></a></sup>, l'analyse médicale - par exemple pour l'étude des traitements de l'épilepsie<sup id="cite_ref-6" class="reference"><a href="#cite_note-6"><span class="cite-bracket">[</span>6<span class="cite-bracket">]</span></a></sup> par <a href="Stimulation_vagale" title="Stimulation vagale">stimulation vagale</a>, la caractérisation d'émetteurs de <a href="Spam" title="Spam">pourriels</a> (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">spam</span>&nbsp;»</span>)<sup id="cite_ref-7" class="reference"><a href="#cite_note-7"><span class="cite-bracket">[</span>7<span class="cite-bracket">]</span></a></sup>, l'analyse du mouvement<sup id="cite_ref-8" class="reference"><a href="#cite_note-8"><span class="cite-bracket">[</span>8<span class="cite-bracket">]</span></a></sup>, l'analyse des termes publicitaires sur internet<sup id="cite_ref-9" class="reference"><a href="#cite_note-9"><span class="cite-bracket">[</span>9<span class="cite-bracket">]</span></a></sup>, ...
</p>
<div class="mw-heading mw-heading2"><h2 id="Types">Types</h2></div>
<p>Dans les différents algorithmes qui utilisent la classification double, on trouve différents types de bicluster&nbsp;:
</p>
<ul><li><span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs constantes (a),</li>
<li><span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs constantes en lignes (b) ou en colonnes (c),</li>
<li><span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs cohérentes (d, e).</li></ul>
<table border="0" cellspacing="20">
<tbody><tr>
<td>
<table border="1px solid black" cellpadding="5" cellspacing="0">
<caption>a) <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs constantes
</caption>
<tbody><tr>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6
</td></tr>
<tr>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6
</td></tr>
<tr>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6
</td></tr>
<tr>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6
</td></tr>
<tr>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6</td>
<td>7,6
</td></tr></tbody></table>
</td>
<td>
<table border="1px solid black" cellpadding="5" cellspacing="0">
<caption>b)<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs constantes en lignes
</caption>
<tbody><tr>
<td>1,2</td>
<td>1,2</td>
<td>1,2</td>
<td>1,2</td>
<td>1,2
</td></tr>
<tr>
<td>2,1</td>
<td>2,1</td>
<td>2,1</td>
<td>2,1</td>
<td>2,1
</td></tr>
<tr>
<td>3,2</td>
<td>3,2</td>
<td>3,2</td>
<td>3,2</td>
<td>3,2
</td></tr>
<tr>
<td>4,1</td>
<td>4,1</td>
<td>4,1</td>
<td>4,1</td>
<td>4,1
</td></tr>
<tr>
<td>4,2</td>
<td>4,2</td>
<td>4,2</td>
<td>4,2</td>
<td>4,2
</td></tr></tbody></table>
</td>
<td>
<table border="1px solid black" cellpadding="5" cellspacing="0">
<caption>c)<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs constantes en colonnes
</caption>
<tbody><tr>
<td>1,0</td>
<td>2,0</td>
<td>3,0</td>
<td>4,0</td>
<td>5,0
</td></tr>
<tr>
<td>1,0</td>
<td>2,0</td>
<td>3,0</td>
<td>4,0</td>
<td>5,0
</td></tr>
<tr>
<td>1,0</td>
<td>2,0</td>
<td>3,0</td>
<td>4,0</td>
<td>5,0
</td></tr>
<tr>
<td>1,0</td>
<td>2,0</td>
<td>3,0</td>
<td>4,0</td>
<td>5,0
</td></tr>
<tr>
<td>1,0</td>
<td>2,0</td>
<td>3,0</td>
<td>4,0</td>
<td>5,0
</td></tr></tbody></table>
</td>
<td>
<table border="1px solid black" cellpadding="5" cellspacing="0">
<caption>d) <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs cohérentes (additives)
</caption>
<tbody><tr>
<td>1.0</td>
<td>4.0</td>
<td>5.0</td>
<td>0.0</td>
<td>1.5
</td></tr>
<tr>
<td>4.0</td>
<td>7.0</td>
<td>8.0</td>
<td>3.0</td>
<td>4.5
</td></tr>
<tr>
<td>3.0</td>
<td>6.0</td>
<td>7.0</td>
<td>2.0</td>
<td>3.5
</td></tr>
<tr>
<td>5.0</td>
<td>8.0</td>
<td>9.0</td>
<td>4.0</td>
<td>5.5
</td></tr>
<tr>
<td>2.0</td>
<td>5.0</td>
<td>6.0</td>
<td>1.0</td>
<td>2.5
</td></tr></tbody></table>
</td>
<td>
<table border="1px solid black" cellpadding="5" cellspacing="0">
<caption>e)<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-cluster</span>&nbsp;»</span> à valeurs cohérentes (multiplicative)
</caption>
<tbody><tr>
<td>1.0</td>
<td>0.5</td>
<td>2.0</td>
<td>0.2</td>
<td>0.8
</td></tr>
<tr>
<td>2.0</td>
<td>1.0</td>
<td>4.0</td>
<td>0.4</td>
<td>1.6
</td></tr>
<tr>
<td>3.0</td>
<td>1.5</td>
<td>6.0</td>
<td>0.6</td>
<td>2.4
</td></tr>
<tr>
<td>4.0</td>
<td>2.0</td>
<td>8.0</td>
<td>0.8</td>
<td>3.2
</td></tr>
<tr>
<td>5.0</td>
<td>2.5</td>
<td>10.0</td>
<td>1.0</td>
<td>4.0
</td></tr></tbody></table>
</td></tr></tbody></table>
<p>En d) la notion d'additivité se comprend comme ceci&nbsp;: <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle +3,-1,+2,-3}">
<semantics>
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<mstyle displaystyle="true" scriptlevel="0">
<mo>+</mo>
<mn>3</mn>
<mo>,</mo>
<mo>−<!-- − --></mo>
<mn>1</mn>
<mo>,</mo>
<mo>+</mo>
<mn>2</mn>
<mo>,</mo>
<mo>−<!-- − --></mo>
<mn>3</mn>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle +3,-1,+2,-3}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/9fa13df7ac89536c20a5cb059a6eda5b8f69e0ce.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.671ex; width:14.984ex; height:2.509ex;" alt="{\displaystyle +3,-1,+2,-3}" loading="lazy"></span> en colonnes, <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle +3,+1,-5,+1,5}">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<mo>+</mo>
<mn>3</mn>
<mo>,</mo>
<mo>+</mo>
<mn>1</mn>
<mo>,</mo>
<mo>−<!-- − --></mo>
<mn>5</mn>
<mo>,</mo>
<mo>+</mo>
<mn>1</mn>
<mo>,</mo>
<mn>5</mn>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle +3,+1,-5,+1,5}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/ab54ede491b66348b93086cdd77d09020e72057d.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.671ex; width:17.181ex; height:2.509ex;" alt="{\displaystyle +3,+1,-5,+1,5}" loading="lazy"></span> en lignes; en e) le motif est <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle {\frac {1}{2}},*4,{\frac {1}{10}},*4}">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<mrow class="MJX-TeXAtom-ORD">
<mfrac>
<mn>1</mn>
<mn>2</mn>
</mfrac>
</mrow>
<mo>,</mo>
<mo>∗<!-- ∗ --></mo>
<mn>4</mn>
<mo>,</mo>
<mrow class="MJX-TeXAtom-ORD">
<mfrac>
<mn>1</mn>
<mn>10</mn>
</mfrac>
</mrow>
<mo>,</mo>
<mo>∗<!-- ∗ --></mo>
<mn>4</mn>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle {\frac {1}{2}},*4,{\frac {1}{10}},*4}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/fd62ec8ba49f45f99dd2ef169880d08984f8c0f7.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -1.838ex; width:12.911ex; height:5.176ex;" alt="{\displaystyle {\frac {1}{2}},*4,{\frac {1}{10}},*4}" loading="lazy"></span> en colonnes et <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle *2,*1.5,{\frac {4}{3}},{\frac {5}{4}}}">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<mo>∗<!-- ∗ --></mo>
<mn>2</mn>
<mo>,</mo>
<mo>∗<!-- ∗ --></mo>
<mn>1.5</mn>
<mo>,</mo>
<mrow class="MJX-TeXAtom-ORD">
<mfrac>
<mn>4</mn>
<mn>3</mn>
</mfrac>
</mrow>
<mo>,</mo>
<mrow class="MJX-TeXAtom-ORD">
<mfrac>
<mn>5</mn>
<mn>4</mn>
</mfrac>
</mrow>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle *2,*1.5,{\frac {4}{3}},{\frac {5}{4}}}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/33884fffd8b17ec14e192772d57390dbf4de31de.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -1.838ex; width:13.558ex; height:5.176ex;" alt="{\displaystyle *2,*1.5,{\frac {4}{3}},{\frac {5}{4}}}" loading="lazy"></span>.
</p>
<div class="mw-heading mw-heading2"><h2 id="Algorithmes">Algorithmes</h2></div><p>
Le but des algorithmes de classification double est de trouver, s'il existe, le plus grand <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">bi-cluster</span>&nbsp;»</span> contenu dans une matrice, en maximisant une <a href="Fonction_objectif" title="Fonction objectif">fonction objectif</a>. On peut prendre comme fonction, avec les notations adoptées ci-dessus&nbsp;: </p><div class="center"> <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle f_{1}=\left|\mathrm {I} \right|+\left|J\right|}">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<msub>
<mi>f</mi>
<mrow class="MJX-TeXAtom-ORD">
<mn>1</mn>
</mrow>
</msub>
<mo>=</mo>
<mrow>
<mo>|</mo>
<mrow class="MJX-TeXAtom-ORD">
<mi mathvariant="normal">I</mi>
</mrow>
<mo>|</mo>
</mrow>
<mo>+</mo>
<mrow>
<mo>|</mo>
<mi>J</mi>
<mo>|</mo>
</mrow>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle f_{1}=\left|\mathrm {I} \right|+\left|J\right|}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/b6f307c33f328e372d0eee7087d3bba95ccfc154.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.838ex; width:13.031ex; height:2.843ex;" alt="{\displaystyle f_{1}=\left|\mathrm {I} \right|+\left|J\right|}" loading="lazy"></span> ou <span class="mwe-math-element mwe-math-element-inline"><span class="mwe-math-mathml-inline mwe-math-mathml-a11y" style="display: none;"><math xmlns="http://www.w3.org/1998/Math/MathML" alttext="{\displaystyle f_{2}=\left|\mathrm {I} \right|*\left|J\right|}">
<semantics>
<mrow class="MJX-TeXAtom-ORD">
<mstyle displaystyle="true" scriptlevel="0">
<msub>
<mi>f</mi>
<mrow class="MJX-TeXAtom-ORD">
<mn>2</mn>
</mrow>
</msub>
<mo>=</mo>
<mrow>
<mo>|</mo>
<mrow class="MJX-TeXAtom-ORD">
<mi mathvariant="normal">I</mi>
</mrow>
<mo>|</mo>
</mrow>
<mo>∗<!-- ∗ --></mo>
<mrow>
<mo>|</mo>
<mi>J</mi>
<mo>|</mo>
</mrow>
</mstyle>
</mrow>
<annotation encoding="application/x-tex">{\displaystyle f_{2}=\left|\mathrm {I} \right|*\left|J\right|}</annotation>
</semantics>
</math></span><img src="./_assets_/eb734a37dd21ce173a46342d1cc64c92/da319df8b09f5aebb80ad9ca47401722fedbad1a.svg" class="mwe-math-fallback-image-inline mw-invert skin-invert" aria-hidden="true" style="vertical-align: -0.838ex; width:12.385ex; height:2.843ex;" alt="{\displaystyle f_{2}=\left|\mathrm {I} \right|*\left|J\right|}" loading="lazy"></span><sup id="cite_ref-10" class="reference"><a href="#cite_note-10"><span class="cite-bracket">[</span>10<span class="cite-bracket">]</span></a></sup></div>
<p>De nombreux algorithmes ont été développés notamment par la <a href="Bio-informatique" title="Bio-informatique">bio-informatique</a>, dont&nbsp;:
<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Block clustering</span>&nbsp;»</span>, CTWC (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Coupled Two-Way Clustering</span>&nbsp;»</span>) , ITWC (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Interrelated Two-Way Clustering</span>&nbsp;»</span>), δ-bicluster, δ-pCluster, δ-pattern, FLOC, OPC, <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Plaid Model</span>&nbsp;»</span>, OPSMs (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Order-preserving submatrixes</span>&nbsp;»</span>), Gibbs, SAMBA (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Statistical-Algorithmic Method for Bicluster Analysis</span>&nbsp;»</span>)<sup id="cite_ref-11" class="reference"><a href="#cite_note-11"><span class="cite-bracket">[</span>11<span class="cite-bracket">]</span></a></sup>, RoBA (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Robust Biclustering Algorithm</span>&nbsp;»</span>), <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Crossing Minimization</span>&nbsp;»</span><sup id="cite_ref-ahsan_12-0" class="reference"><a href="#cite_note-ahsan-12"><span class="cite-bracket">[</span>12<span class="cite-bracket">]</span></a></sup>
, cMonkey<sup id="cite_ref-13" class="reference"><a href="#cite_note-13"><span class="cite-bracket">[</span>13<span class="cite-bracket">]</span></a></sup>, PRMs, DCC, LEB (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Localize and Extract Biclusters</span>&nbsp;»</span>), QUBIC (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">QUalitative BIClustering</span>&nbsp;»</span>), BCCA (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Bi-Correlation Clustering Algorithm</span>&nbsp;»</span>), FABIA (<span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">Factor Analysis for Bicluster Acquisition</span>&nbsp;»</span>)<sup id="cite_ref-14" class="reference"><a href="#cite_note-14"><span class="cite-bracket">[</span>14<span class="cite-bracket">]</span></a></sup>. Certains de ces algorithmes ont été comparés par Doruk Bozda, Ashwin S. Kumar et Umit V. Catalyurek<sup id="cite_ref-15" class="reference"><a href="#cite_note-15"><span class="cite-bracket">[</span>15<span class="cite-bracket">]</span></a></sup> en termes de type de motifs recherchés.<br>
Le package <span class="citation not_fr_quote" lang="en">«&nbsp;<span class="italique">biclust</span>&nbsp;»</span><sup id="cite_ref-16" class="reference"><a href="#cite_note-16"><span class="cite-bracket">[</span>16<span class="cite-bracket">]</span></a></sup> propose un ensemble d'outils pour la classification double dans le <a href="R_(logiciel)" class="mw-redirect" title="R (logiciel)">logiciel R</a>.
</p>
<div class="mw-heading mw-heading2"><h2 id="Articles_connexes">Articles connexes</h2></div>
<ul><li><a href="Classification" title="Classification">Classification</a></li>
<li><a href="Classification_automatique" class="mw-redirect" title="Classification automatique">Classification automatique</a></li>
<li><a href="Segmentation_(sciences_humaines)" title="Segmentation (sciences humaines)">Segmentation (sciences humaines)</a></li></ul>
<div class="mw-heading mw-heading2"><h2 id="Notes_et_références"><span id="Notes_et_r.C3.A9f.C3.A9rences"></span>Notes et références</h2></div>
<div style="font-size:85%; padding-left:1.6em; margin:0.3em 0;"><abbr class="abbr indicateur-langue" title="Langue : anglais">(en)</abbr> Cet article est partiellement ou en totalité issu de l’article de Wikipédia en anglais intitulé <span class="">«&nbsp;<a class="external text" href="https://en.wikipedia.org/wiki/Biclustering?oldid=412909627">Biclustering</a>&nbsp;» <small>(<a class="external text" href="https://en.wikipedia.org/wiki/Biclustering?action=history">voir la liste des auteurs</a>)</small></span>.</div>
<div class="references-small decimal" style=""><div class="mw-references-wrap mw-references-columns"><ol class="references">
<li id="cite_note-1"><span class="mw-cite-backlink"><a href="#cite_ref-1">↑</a> </span><span class="reference-text">Tran Trang, Nguyen Cam Chi, Hoang Ngoc Minh,<a rel="nofollow" class="external text" href="http://www.genopole-lille.fr/spip/IMG/pdf/TSI_Post_Genomique.pdf">Bi-clustering des données de biopuces par les arbres pondérés de plus long préfixe - Chapitre 1 Introduction</a></span>
</li>
<li id="cite_note-2"><span class="mw-cite-backlink"><a href="#cite_ref-2">↑</a> </span><span class="reference-text">Sara C. Madeira, Arlindo L. Oliveira,<a rel="nofollow" class="external text" href="http://www.cs.princeton.edu/courses/archive/spr05/cos598E/Biclustering.pdf">Biclustering Biological Data Analysis</a></span>
</li>
<li id="cite_note-3"><span class="mw-cite-backlink"><a href="#cite_ref-3">↑</a> </span><span class="reference-text"><span class="ouvrage" id="Y,_Church_GM2000"><span class="ouvrage" id="Cheng_Y,_Church_GM2000"><abbr class="abbr indicateur-langue" title="Langue : anglais">(en)</abbr> Cheng Y, Church GM, «&nbsp;<cite style="font-style:normal" lang="en">Biclustering of expression data</cite>&nbsp;», <i><span class="lang-en" lang="en">Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology</span></i>,‎ <time>2000</time>, <abbr class="abbr" title="pages">p.</abbr>&nbsp;<span class="nowrap">93–103</span><span class="Z3988" title="ctx_ver=Z39.88-2004&amp;rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&amp;rft.genre=article&amp;rft.atitle=Biclustering+of+expression+data&amp;rft.jtitle=Proceedings+of+the+8th+International+Conference+on+Intelligent+Systems+for+Molecular+Biology&amp;rft.au=Cheng+Y%2C+Church+GM&amp;rft.date=2000&amp;rft.pages=93%E2%80%93103&amp;rfr_id=info%3Asid%2Ffr.wikipedia.org%3AClassification+double"></span></span></span></span>
</li>
<li id="cite_note-4"><span class="mw-cite-backlink"><a href="#cite_ref-4">↑</a> </span><span class="reference-text">Yizong Cheng, George M. Church <a rel="nofollow" class="external text" href="ftp://ftp.npaci.edu/pub/sdsc/biology/ISMB00/157.pdf">Biclustering of Expression Data</a></span>
</li>
<li id="cite_note-5"><span class="mw-cite-backlink"><a href="#cite_ref-5">↑</a> </span><span class="reference-text">Xin Sun, Qiming Hou,Zhong Ren, Kun Zhou, Baining Guo,<a rel="nofollow" class="external text" href="http://www.kunzhou.net/2010/biclustering-preprint.pdf">Radiance Transfer Biclustering for Real-time All-frequency Bi-scale Rendering</a></span>
</li>
<li id="cite_note-6"><span class="mw-cite-backlink"><a href="#cite_ref-6">↑</a> </span><span class="reference-text">Stanislav Busygin,Nikita Boyko, Panos M. Pardalos,Michael Bewernitz, Georges Ghacibeh,<a rel="nofollow" class="external text" href="http://www.ise.ufl.edu/cao/Book_DMSAOB/014busygin.pdf">Biclustering EEG data from epileptic patients treated with vagus nerve stimulation</a></span>
</li>
<li id="cite_note-7"><span class="mw-cite-backlink"><a href="#cite_ref-7">↑</a> </span><span class="reference-text">Kevin S. Xu, Mark Kliger, Alfred O. Hero III, <a rel="nofollow" class="external text" href="http://www.eecs.umich.edu/~xukevin/xu_spam_dm_2010_poster.pdf">Identifying Spammers by Their Resource Usage Patterns</a></span>
</li>
<li id="cite_note-8"><span class="mw-cite-backlink"><a href="#cite_ref-8">↑</a> </span><span class="reference-text">Keren Erez, Jacob Goldberger, Ronen Sosnik, Moshe Shemesh, Susan Rothstein,Moshe Abeles, <a rel="nofollow" class="external text" href="http://www.eng.biu.ac.il/~goldbej/papers/JCNS_2009.pdf">Analyzing Movement Trajectories Using a Markov Bi-Clustering Method</a></span>
</li>
<li id="cite_note-9"><span class="mw-cite-backlink"><a href="#cite_ref-9">↑</a> </span><span class="reference-text">Dmitry I. Ignatov, <a rel="nofollow" class="external text" href="http://reasoningweb.org/2010/participants-material/paper_ignatov.pdf">Concept-based Biclustering for Internet Advertisement </a></span>
</li>
<li id="cite_note-10"><span class="mw-cite-backlink"><a href="#cite_ref-10">↑</a> </span><span class="reference-text">Stefano Lonardi, Qiaofeng Yang, Wojciech Szpankowski,<a rel="nofollow" class="external text" href="http://www.cs.ucr.edu/~stelo/cpm/cpm04/08_Lonardi.pdf">Finding biclusters by random projections</a></span>
</li>
<li id="cite_note-11"><span class="mw-cite-backlink"><a href="#cite_ref-11">↑</a> </span><span class="reference-text">
<span class="ouvrage" id="A,_Sharan_R,_Kupiec_M_and_Sahmir_R2004"><span class="ouvrage" id="Tanay_A,_Sharan_R,_Kupiec_M_and_Sahmir_R2004"><abbr class="abbr indicateur-langue" title="Langue : anglais">(en)</abbr> Tanay A, Sharan R, Kupiec M and Sahmir R, «&nbsp;<cite style="font-style:normal" lang="en">Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data</cite>&nbsp;», <i><span class="lang-en" lang="en">Proc Natl Acad Sci USA</span></i>, <abbr class="abbr" title="volume">vol.</abbr>&nbsp;101, <abbr class="abbr" title="numéro">n<sup>o</sup></abbr>&nbsp;9,‎ <time>2004</time>, <abbr class="abbr" title="pages">p.</abbr>&nbsp;<span class="nowrap">2981-2986</span> <small style="line-height:1em;">(<a href="PubMed" title="PubMed">PMID</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://www.ncbi.nlm.nih.gov/pubmed/16749936">16749936</a></span>, <a href="PubMed_Central" title="PubMed Central">PMCID</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://www.ncbi.nlm.nih.gov/pmc/articles/14973197">14973197</a></span>, <a href="Digital_Object_Identifier" title="Digital Object Identifier">DOI</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://dx.doi.org/10.1073/pnas.0308661100">10.1073/pnas.0308661100</a></span>)</small><span class="Z3988" title="ctx_ver=Z39.88-2004&amp;rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&amp;rft.genre=article&amp;rft.atitle=Revealing+modularity+and+organization+in+the+yeast+molecular+network+by+integrated+analysis+of+highly+heterogeneous+genomewide+data&amp;rft.jtitle=Proc+Natl+Acad+Sci+USA&amp;rft.issue=9&amp;rft.au=Tanay+A%2C+Sharan+R%2C+Kupiec+M+and+Sahmir+R&amp;rft.date=2004&amp;rft.volume=101&amp;rft.pages=2981-2986&amp;rft_id=info%3Adoi%2F10.1073%2Fpnas.0308661100&amp;rft_id=info%3Apmid%2F16749936&amp;rfr_id=info%3Asid%2Ffr.wikipedia.org%3AClassification+double"></span></span></span></span>
</li>
<li id="cite_note-ahsan-12"><span class="mw-cite-backlink"><a href="#cite_ref-ahsan_12-0">↑</a> </span><span class="reference-text">Ahsan Abdullah, <a rel="nofollow" class="external text" href="http://dspacedev.stir.ac.uk/bitstream/1893/252/3/Thesis-AhsanAbdullah-2007.pdf">Data Mining Using the Crossing Minimization Paradigm</a></span>
</li>
<li id="cite_note-13"><span class="mw-cite-backlink"><a href="#cite_ref-13">↑</a> </span><span class="reference-text">
<span class="ouvrage" id="DJ,_Baliga_NS,_Bonneau_R2006"><span class="ouvrage" id="Reiss_DJ,_Baliga_NS,_Bonneau_R2006"><abbr class="abbr indicateur-langue" title="Langue : anglais">(en)</abbr> Reiss DJ, Baliga NS, Bonneau R, «&nbsp;<cite style="font-style:normal" lang="en">Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks</cite>&nbsp;», <i><span class="lang-en" lang="en">BMC Bioinformatics</span></i>, <abbr class="abbr" title="volume">vol.</abbr>&nbsp;2, <abbr class="abbr" title="numéro">n<sup>o</sup></abbr>&nbsp;7,‎ <time>2006</time>, <abbr class="abbr" title="pages">p.</abbr>&nbsp;<span class="nowrap">280–302</span> <small style="line-height:1em;">(<a href="PubMed" title="PubMed">PMID</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://www.ncbi.nlm.nih.gov/pubmed/16749936">16749936</a></span>, <a href="PubMed_Central" title="PubMed Central">PMCID</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://www.ncbi.nlm.nih.gov/pmc/articles/1502140">1502140</a></span>, <a href="Digital_Object_Identifier" title="Digital Object Identifier">DOI</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://dx.doi.org/10.1186/1471-2105-7-280">10.1186/1471-2105-7-280</a></span>)</small><span class="Z3988" title="ctx_ver=Z39.88-2004&amp;rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&amp;rft.genre=article&amp;rft.atitle=Integrated+biclustering+of+heterogeneous+genome-wide+datasets+for+the+inference+of+global+regulatory+networks&amp;rft.jtitle=BMC+Bioinformatics&amp;rft.issue=7&amp;rft.au=Reiss+DJ%2C+Baliga+NS%2C+Bonneau+R&amp;rft.date=2006&amp;rft.volume=2&amp;rft.pages=280%E2%80%93302&amp;rft_id=info%3Adoi%2F10.1186%2F1471-2105-7-280&amp;rft_id=info%3Apmid%2F16749936&amp;rfr_id=info%3Asid%2Ffr.wikipedia.org%3AClassification+double"></span></span></span></span>
</li>
<li id="cite_note-14"><span class="mw-cite-backlink"><a href="#cite_ref-14">↑</a> </span><span class="reference-text">
<span class="ouvrage" id="S,_Bodenhofer_U,_Heusel_M,_Mayr_A,_Mitterecker_A,_Kasim_A,_Khamiakova_T,_Van_Sanden_S,_Lin_D,_Talloen_W,_Bijnens_L,_Gohlmann_HWH,_Shkedy_Z,_Clevert_DA2010"><span class="ouvrage" id="Hochreiter_S,_Bodenhofer_U,_Heusel_M,_Mayr_A,_Mitterecker_A,_Kasim_A,_Khamiakova_T,_Van_Sanden_S,_Lin_D,_Talloen_W,_Bijnens_L,_Gohlmann_HWH,_Shkedy_Z,_Clevert_DA2010"><abbr class="abbr indicateur-langue" title="Langue : anglais">(en)</abbr> Hochreiter S, Bodenhofer U, Heusel M, Mayr A, Mitterecker A, Kasim A, Khamiakova T, Van Sanden S, Lin D, Talloen W, Bijnens L, Gohlmann HWH, Shkedy Z, Clevert DA, «&nbsp;<cite style="font-style:normal" lang="en">FABIA: factor analysis for bicluster acquisition</cite>&nbsp;», <i><span class="lang-en" lang="en">Bioinformatics</span></i>, <abbr class="abbr" title="volume">vol.</abbr>&nbsp;26, <abbr class="abbr" title="numéro">n<sup>o</sup></abbr>&nbsp;12,‎ <time>2010</time>, <abbr class="abbr" title="pages">p.</abbr>&nbsp;<span class="nowrap">1520–1527</span> <small style="line-height:1em;">(<a href="PubMed" title="PubMed">PMID</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://www.ncbi.nlm.nih.gov/pubmed/20418340">20418340</a></span>, <a href="PubMed_Central" title="PubMed Central">PMCID</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://www.ncbi.nlm.nih.gov/pmc/articles/2881408">2881408</a></span>, <a href="Digital_Object_Identifier" title="Digital Object Identifier">DOI</a>&nbsp;<span class=" noarchive nowrap"><a rel="nofollow" class="external text" href="https://dx.doi.org/10.1093/bioinformatics/btq227">10.1093/bioinformatics/btq227</a></span>)</small><span class="Z3988" title="ctx_ver=Z39.88-2004&amp;rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&amp;rft.genre=article&amp;rft.atitle=FABIA%3A+factor+analysis+for+bicluster+acquisition&amp;rft.jtitle=Bioinformatics&amp;rft.issue=12&amp;rft.au=Hochreiter+S%2C+Bodenhofer+U%2C+Heusel+M%2C++Mayr+A%2C+Mitterecker+A%2C+Kasim+A%2C+Khamiakova+T%2C+Van+Sanden+S%2C+Lin+D%2C+Talloen+W%2C++Bijnens+L%2C+Gohlmann+HWH%2C+Shkedy+Z%2C+Clevert+DA&amp;rft.date=2010&amp;rft.volume=26&amp;rft.pages=1520%E2%80%931527&amp;rft_id=info%3Adoi%2F10.1093%2Fbioinformatics%2Fbtq227&amp;rft_id=info%3Apmid%2F20418340&amp;rfr_id=info%3Asid%2Ffr.wikipedia.org%3AClassification+double"></span></span></span></span>
</li>
<li id="cite_note-15"><span class="mw-cite-backlink"><a href="#cite_ref-15">↑</a> </span><span class="reference-text">Doruk Bozda, Ashwin S. Kumar et Umit V. Catalyurek, <a rel="nofollow" class="external text" href="http://bmi.osu.edu/hpc/papers/Bozdag10-BCB.pdf">Comparative Analysis of Biclustering Algorithms</a></span>
</li>
<li id="cite_note-16"><span class="mw-cite-backlink"><a href="#cite_ref-16">↑</a> </span><span class="reference-text">Sebastian Kaiser, Friedrich Leisch, <a rel="nofollow" class="external text" href="http://epub.ub.uni-muenchen.de/3293/1/S_Kaiser_biclust.pdf">A Toolbox for Bicluster Analysis in R</a></span>
</li>
</ol></div>
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